Column | MySQL Type | Oracle Type | Nullable | Description |
---|---|---|---|---|
WID | BIGINT | NUMBER | No | Warehouse identifier for this entity |
DataSetWID | BIGINT | NUMBER | No | Reference to the data set from which the entity came from |
CompositePosition | BIGINT | NUMBER | Yes | Represents 1..n association between CompositePosition and MismatchInformation Differences in how the contained compositeSequence matches its target compositeSequence's sequence. |
FeatureInformation | BIGINT | NUMBER | Yes | Represents 1..n association between FeatureInformation and MismatchInformation Differences in how the feature matches the reporter's sequence, typical examples is the Affymetrix probe pair where one of the features is printed with a mismatch to the other feature's perfect match. |
StartCoord | SMALLINT | NUMBER | Yes | MAGE attribute MismatchInformation.startCoord Offset into the sequence that the mismatch occurs. |
NewSequence | VARCHAR | VARCHAR2(255) | Yes | MAGE attribute MismatchInformation.newSequence The sequence that replaces the specified sequence starting at start_coord. |
ReplacedLength | SMALLINT | NUMBER | Yes | MAGE attribute MismatchInformation.replacedLength Length of the original sequence that is replaced. A deletion is specified when the length of the newSequence is less than the replacedLength. |
ReporterPosition | BIGINT | NUMBER | Yes | Represents 1..n association between ReporterPosition and MismatchInformation Differences in how the reporter matches its compositeSequence's sequence. |
Name | Columns |
---|---|
MismatchInformation1 | DataSetWID |
MismatchInformation2 | CompositePosition |
MismatchInformation3 | FeatureInformation |
MismatchInformation4 | StartCoord |
MismatchInformation5 | NewSequence |
MismatchInformation6 | ReplacedLength |
MismatchInformation7 | ReporterPosition |