Column | MySQL Type | Oracle Type | Nullable | Description |
---|---|---|---|---|
WID | BIGINT | NUMBER | No | Warehouse identifier for this entity |
DataSetWID | BIGINT | NUMBER | No | Reference to the data set from which the entity came from |
MAGEClass | VARCHAR | VARCHAR2(100) | No | Discriminator column specifies type of object this row represents |
Identifier | VARCHAR | VARCHAR2(255) | Yes | MAGE attribute Identifiable.identifier An identifier is an unambiguous string that is unique within the scope (i.e. a document, a set of related documents, or a repository) of its use. |
Name | VARCHAR | VARCHAR2(255) | Yes | MAGE attribute Identifiable.name The potentially ambiguous common identifier. |
CompositeSequence | BIGINT | NUMBER | Yes | Represents n..1 association between CompositeCompositeMap and CompositeSequence A map to the compositeSequences that compose this CompositeSequence. |
Reporter | BIGINT | NUMBER | Yes | Represents n..1 association between FeatureReporterMap and Reporter Associates features with their reporter. |
CompositeSequence2 | BIGINT | NUMBER | Yes | Represents n..1 association between ReporterCompositeMap and CompositeSequence A map to the reporters that compose this CompositeSequence. |
BioAssayMapTarget | BIGINT | NUMBER | Yes | Represents n..1 association between BioAssayMap and DerivedBioAssay The DerivedBioAssay that is produced by the sources of the BioAssayMap. |
TargetQuantitationType | BIGINT | NUMBER | Yes | Represents n..1 association between QuantitationTypeMap and QuantitationType The QuantitationType whose value will be produced from the values of the source QuantitationType according to the Protocol. |
DerivedBioAssayDataTarget | BIGINT | NUMBER | Yes | Represents n..1 association between Transformation and DerivedBioAssayData The association between the DerivedBioAssayData and the Transformation event that produced it. |
QuantitationTypeMapping | BIGINT | NUMBER | Yes | Represents 1..1 association between Transformation and QuantitationTypeMapping The collection of mappings for the QuantitationTypes. |
DesignElementMapping | BIGINT | NUMBER | Yes | Represents 1..1 association between Transformation and DesignElementMapping The collection of mappings for the DesignElements. |
Transformation_BioAssayMapping | BIGINT | NUMBER | Yes | Represents 1..1 association between Transformation and BioAssayMapping The collection of mappings for the BioAssays. |
BioMaterial_Treatments | BIGINT | NUMBER | Yes | Represents 1..n association between BioMaterial and Treatment This association is one way from BioMaterial to Treatment. From this a BioMaterial can discover the amount and type of BioMaterial that was part of the treatment that produced it. |
Order_ | SMALLINT | NUMBER | Yes | MAGE attribute Treatment.order The chronological order in which a treatment occurred (in relation to other treatments). More than one treatment can have the same chronological order indicating that they happened (or were caused to happen) simultaneously. |
Treatment_Action | BIGINT | NUMBER | Yes | Represents 1..1 association between Treatment and OntologyEntry The event that occurred (e.g. grow, wait, add, etc...). The actions should be a recommended vocabulary |
Treatment_ActionMeasurement | BIGINT | NUMBER | Yes | Represents 1..1 association between Treatment and Measurement Measures events like duration, centrifuge speed, etc. |
Array_ | BIGINT | NUMBER | Yes | Represents n..1 association between BioAssayCreation and Array The array used in the BioAssayCreation event. |
PhysicalBioAssayTarget | BIGINT | NUMBER | Yes | Represents n..1 association between BioAssayCreation and PhysicalBioAssay The association between the BioAssayCreation event (typically Hybridization) and the PhysicalBioAssay and its annotation of this event. |
PhysicalBioAssay | BIGINT | NUMBER | Yes | Represents n..1 association between BioAssayTreatment and PhysicalBioAssay The set of treatments undergone by this PhysicalBioAssay. |
Target | BIGINT | NUMBER | Yes | Represents n..1 association between BioAssayTreatment and PhysicalBioAssay The PhysicalBioAssay that was treated. |
PhysicalBioAssaySource | BIGINT | NUMBER | Yes | Represents n..1 association between FeatureExtraction and PhysicalBioAssay The PhysicalBioAssay used in the FeatureExtraction event. |
MeasuredBioAssayTarget | BIGINT | NUMBER | Yes | Represents n..1 association between FeatureExtraction and MeasuredBioAssay The association between the MeasuredBioAssay and the FeatureExtraction Event. |
PhysicalBioAssay2 | BIGINT | NUMBER | Yes | Represents 1..n association between PhysicalBioAssay and BioAssayTreatment The set of treatments undergone by this PhysicalBioAssay. |
Table | Column |
---|---|
SequencePosition | CompositeCompositeMap |
SequencePosition | ReporterCompositeMap |
FeatureInformation | FeatureReporterMap |
BioAssayData | ProducerTransformation |
BioMaterialMeasurement | Treatment |
BioMaterialMeasurement | BioAssayCreation |
CompoundMeasurement | Treatment_CompoundMeasurements |
BioAssay | FeatureExtraction |
BioAssay | BioAssayCreation |
ParameterizableApplication | BioEvent_ProtocolApplications |
QuantTypeWIDQuantTypeMapWID | QuantitationTypeMapWID |
ComposSeqWIDRepoComposMapWID | ReporterCompositeMapWID |
ComposSeqWIDComposComposMapWID | CompositeCompositeMapWID |
ReporterWIDFeatureReporMapWID | FeatureReporterMapWID |
BioAssayMapWIDBioAssayWID | BioAssayMapWID |
BAssayMappingWIDBAssayMapWID | BioAssayMapWID |
DesnElMappingWIDDesnElMapWID | DesignElementMapWID |
QuantTypeMapWIDQuantTypeWID | QuantitationTypeMapWID |
QuantTyMapWIDQuantTyMapWI | QuantitationTypeMapWID |
TransformWIDBioAssayDataWID | TransformationWID |
DerivBioAssayWIDBioAssayMapWID | BioAssayMapWID |
ImageAcquisitionWIDImageWID | ImageAcquisitionWID |
Name | Columns |
---|---|
BioEvent1 | DataSetWID |
BioEvent2 | MAGEClass |
BioEvent3 | Identifier |
BioEvent4 | Name |
BioEvent5 | CompositeSequence |
BioEvent6 | Reporter |
BioEvent7 | CompositeSequence2 |
BioEvent8 | BioAssayMapTarget |
BioEvent9 | TargetQuantitationType |
BioEvent10 | DerivedBioAssayDataTarget |
BioEvent11 | QuantitationTypeMapping |
BioEvent12 | DesignElementMapping |
BioEvent13 | Transformation_BioAssayMapping |
BioEvent14 | BioMaterial_Treatments |
BioEvent15 | Order_ |
BioEvent16 | Treatment_Action |
BioEvent17 | Treatment_ActionMeasurement |
BioEvent18 | Array_ |
BioEvent19 | PhysicalBioAssayTarget |
BioEvent20 | PhysicalBioAssay |
BioEvent21 | Target |
BioEvent22 | PhysicalBioAssaySource |
BioEvent23 | MeasuredBioAssayTarget |
BioEvent24 | PhysicalBioAssay2 |